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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918388.1_cds_XP_016467849.1_60555
CDS Infomation

[gene=LOC107790433] [db_xref=GeneID:107790433] [protein=asparagine--tRNA ligase, cytoplasmic 2-like] [protein_id=XP_016467849.1] [location=complement(join(65528..65711,65800..65858,65966..66095,66177..66241,66330..66515,66604..67188,67449..67685,67777..68175))] [gbkey=CDS]
Sequence

ATGGCCTCAGAGCAAGCTCCGGTTGAGATGCCAGCCAACTTTTCGAAATACACGAAAAGG
GTGATGTTGAAAACTATATTAGGACGTACTGATGGTGGGGTTGGGTTAGTTCGTCAGAGT
GTAGTAATTGGGGGGTGGGTTAAATCCTCTATGGAGATCAGAAAACAACCTGTAACGCCA
CCACCAGCGGCTCCTGCTCCTCCGGTTGTGAGTCCAAAAGATGTTACCTGTTCTGAAGTA
TTTCAATCTCGGATACCACTATTTAGGTCTATTATGAAGGTTTTTGGGGCAGGGGAATAT
CGTGTACGTGAAAAATTGGATGTTGTTGTTCGAAAGGCGCCTCAGCCCTCTGTCTCAATA
TTGCAAGTTAGTGATGGTTCTTGTGTGACAAGTCTTCAGGTTCTTGTGGACTCAGCACTA
GCGAATCCGTGCCAAGTTATGCCAACTGGAACATGTGTATTAATTGAAGGTGTATTGCAG
CAGCCATCAATGCAGGGGAAACATTATGTTGAGCTGCAAGCAGAGAAAATCTTACATCTT
GGTTTGGTAGATGAATCTAAGTATCCATTATCTAAGAAACGATTGCCTCTGGAATCTTTA
AGAGATTGTTCCCACTTTCGGCCACGGACAACAACGGTGGCATCTGTCATGCGAATTCAT
AATTCCCTTACTTGGGCAACTCATGCCTTCTTCCAAGATCAAGGGTTCCTTCACGTTCAA
GTACCCATAATTACAAGCACTGATTCTGAAGGTTTTAGTGAGAAATTTCTTGTTACCACT
CTTCTTAGCAAGGGGAAAGAGTATGACCAAATTAGTCCCGCCAAAAACGCTGGAGTCAGT
GTTGAAGCCATCCGGGCTTCTATCAAAGAAAAAACTAAGAAAGTTGAAGAACTAAGCAGA
ACTAACAGCAATAAGGAAGCCTTAGTTGCTGCACAGCAGGACCTGAAGAAAACAAATGAG
CTAGTATCACAGCTGGAAGCTAGGCAAAAAACAAAATCTGGAATCACAATTGAAACCAGA
CAATTTGACTTCTCTAAAGATTTCTTTACACGCCAGACTTATCTAACAGTTTCTGGTCGT
CTTCATCTTGAGAGTCAAGCCTGTGCTCTTGGAAATGTCTACTCATTTGGCCCCAGATTT
AAAGCAGAGAAATTAGAGTCCAAAAAGTCATTAGCTGAGACATGGATGGTAGATGTTGAA
ATGGCCTTCTCAGAGTTAGAGGATGCCATGGATTGCGCAAACGACTTTTTGAAGTTTGTA
TGCAAAAGAATCCTAGACGGTTGCATGGAAGATCTACAATTTGTCTTGAAAAGAATAGAC
AAATCTGTTATGGAGCGCCTCCAATTTACCATATCAAGTTCATTTGAGAGGATTTCTTAT
GCCGAAGCCATAGAAATTCTGAGACAGGTTGCTGGGAAGAAATTTCAGAGTAAGATAGAA
TTGGGAGTTTCTTTGACCGAAGAACATGAAAGCTATTTGGTTGATGCGATATATAAAAAA
CCAGTCATTGTATACAACCATCCAAAAGAACTTAAGCCATTTTATGTCCGTTTGAATGAT
GATGGCAAAACAGTTGCAACATTTGATGTGATTCTACCAAAGGTGGGAGCTCTGATTAGG
GGAAGCCAAAGTGAAGAACGGTTCAATGTGTTGAGCTCAAGAATGAAGGAACTGGGCTTG
CAAAAACAGCAATATGAATGGTATCTAGATCTTCGCAGGCATGGCTCTGCCAAAACCTCT
GGTTTCAGCCTAATGCTTGAACCTTTGGTGCTTTATGCCACTGGCCTGAATGATGTCAAA
GATGTTGTACCTTTCGCTAGAAGTTTCGGCAGAGCCAATAACTAA

Peptide Sequence

PEP ID

XP_016467849.1
PEP Infomation

PREDICTED: asparagine--tRNA ligase, cytoplasmic 2-like [Nicotiana tabacum]
Sequence

MASEQAPVEMPANFSKYTKRVMLKTILGRTDGGVGLVRQSVVIGGWVKSSMEIRKQPVTP
PPAAPAPPVVSPKDVTCSEVFQSRIPLFRSIMKVFGAGEYRVREKLDVVVRKAPQPSVSI
LQVSDGSCVTSLQVLVDSALANPCQVMPTGTCVLIEGVLQQPSMQGKHYVELQAEKILHL
GLVDESKYPLSKKRLPLESLRDCSHFRPRTTTVASVMRIHNSLTWATHAFFQDQGFLHVQ
VPIITSTDSEGFSEKFLVTTLLSKGKEYDQISPAKNAGVSVEAIRASIKEKTKKVEELSR
TNSNKEALVAAQQDLKKTNELVSQLEARQKTKSGITIETRQFDFSKDFFTRQTYLTVSGR
LHLESQACALGNVYSFGPRFKAEKLESKKSLAETWMVDVEMAFSELEDAMDCANDFLKFV
CKRILDGCMEDLQFVLKRIDKSVMERLQFTISSSFERISYAEAIEILRQVAGKKFQSKIE
LGVSLTEEHESYLVDAIYKKPVIVYNHPKELKPFYVRLNDDGKTVATFDVILPKVGALIR
GSQSEERFNVLSSRMKELGLQKQQYEWYLDLRRHGSAKTSGFSLMLEPLVLYATGLNDVK
DVVPFARSFGRANN

Transcript Sequence

Gene sequence data has not been registered.